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2026

Variant Calling at Production Scale: HPC Deployment and Performance Optimization (Part 3)
Upgrade Your Shell: From Bash to Zsh for a Better Terminal Experience
From Bash to Nextflow: GATK Best Practice With Nextflow (Part 2)
Building a Reproducible GATK Variant Calling Bash Workflow with Pixi (Part 1)
Working with Remote Files using bcftools and samtools (HTSlib)
Setting Up a Local Nextflow Training Environment with Code-Server and HPC
Docker Out of Docker: Running Interactive Web Applications for Data Analysis
Containers on HPC: From Docker to Singularity and Apptainer
How to Migrate from In-House Pipelines to Enterprise-Level Workflows: A Proven 3-Step Validation Framework
Unix Pipes in Bioinformatics: How Streaming Data Reduces Memory and Storage
Containers in Bioinformatics: Community Tooling and Efficient Docker Building
Containers in Bioinformatics: Community Tooling and Efficient Docker Building
Bioinformatics Workflow Template: Standardizing Python Pipelines with Modular Design
Running GitHub Actions Locally with act: 5x Faster Development
Machine Learning in Bioinformatics Part 1: Building KNN from Scratch
Introduction to AI/ML in Bioinformatics: Classification Models & Evaluation
Bioinformatics Cost Optimization For Input Using Nextflow (Part 2)
Bioinformatics Cost Optimization for Computing Resources Using Nextflow (Part 1)
Pixi- New conda era
The Evolution of Version Control - CI/CD in bioinformatics (Part 2)
The Evolution of Version Control - Git's Role in Reproducible Bioinformatics (Part 1)
Building a Slurm HPC Cluster (Part 3) - Administration and Best Practices
Building a Slurm HPC Cluster (Part 2) - Scaling to Production with Ansible
Building a Slurm HPC Cluster (Part 1) - Single Node Setup and Fundamentals
RIVER- A Web Application to Run Nf-Core

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Thanh-Giang Tan Nguyen
25
Founder at RIVER

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Thanh-Giang Tan Nguyen