Skip to main content

3 posts tagged with "best-practices"

View All Tags

Containers in Bioinformatics: Community Tooling and Efficient Docker Building

· 21 min read
Thanh-Giang Tan Nguyen
Founder at RIVER

Docker containers are revolutionizing bioinformatics by automating reproducibility and portability across platforms. But what problems can they actually solve? This post shows real-world applications of containers in bioinformatics workflows, then guides you through the simplest possible ways to use, build and debug them.

Containers in Bioinformatics: Community Tooling and Efficient Docker Building

· 21 min read
Thanh-Giang Tan Nguyen
Founder at RIVER

Docker containers are revolutionizing bioinformatics by automating reproducibility and portability across platforms. But what problems can they actually solve? This post shows real-world applications of containers in bioinformatics workflows, then guides you through the simplest possible ways to use, build and debug them.

Building a Slurm HPC Cluster (Part 3) - Administration and Best Practices

· 13 min read
Thanh-Giang Tan Nguyen
Founder at RIVER

In Part 1 and Part 2, we built a complete Slurm HPC cluster from a single node to a production-ready multi-node system. Now let's learn how to manage, maintain, and secure it effectively.

This final post covers daily administration tasks, troubleshooting, security hardening, and integration with data processing frameworks.